Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | CE139_RS21675 | Not Available | Negative | 4708376 - 4708837 | 17407.1 |
| aminotransferase class v-fold plp-dependent enzyme | CE139_RS21680 | Not Available | Positive | 4708970 - 4710118 | 40384.2 |
| amidohydrolase | CE139_RS21685 | Not Available | Negative | 4710119 - 4710910 | 29565.9 |
| pyridoxal phosphate-dependent aminotransferase | CE139_RS21690 | Not Available | Negative | 4710898 - 4712046 | 41709.9 |
| ribosome biogenesis gtpase der | CE139_RS21695 | Not Available | Negative | 4712416 - 4713903 | 55603.7 |
| outer membrane protein assembly factor bamb | CE139_RS21700 | Not Available | Negative | 4714143 - 4715285 | 40629.4 |
| tetratricopeptide repeat protein | CE139_RS21705 | Not Available | Negative | 4715285 - 4715926 | 22872.1 |
| histidine--trna ligase | CE139_RS21710 | Not Available | Negative | 4715938 - 4717245 | 48256.8 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | CE139_RS21715 | Not Available | Negative | 4717270 - 4718382 | 39864.1 |
| helix-turn-helix domain-containing protein | CE139_RS21720 | Not Available | Negative | 4718410 - 4719387 | 34127.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





