Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | CE139_RS01760 | Not Available | Positive | 390784 - 391326 | 19232.1 |
| lysophospholipid acyltransferase family protein | CE139_RS01765 | Not Available | Positive | 391326 - 392075 | 27734.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | CE139_RS01770 | Not Available | Negative | 392470 - 394890 | 90322.3 |
| dna replication/repair protein recf | CE139_RS01775 | Not Available | Negative | 394887 - 395996 | 41770.2 |
| dna polymerase iii subunit beta | CE139_RS01780 | Not Available | Negative | 396007 - 397110 | 41019.4 |
| chromosomal replication initiator protein dnaa | CE139_RS01785 | Not Available | Negative | 397139 - 398602 | 55147.1 |
| 50s ribosomal protein l34 | CE139_RS01790 | Not Available | Positive | 399129 - 399263 | 5177.58 |
| ribonuclease p protein component | CE139_RS01795 | Not Available | Positive | 399276 - 399677 | 14951.0 |
| membrane protein insertion efficiency factor yidd | CE139_RS01800 | Not Available | Positive | 399670 - 399918 | 9250.32 |
| membrane protein insertase yidc | CE139_RS01805 | Not Available | Positive | 399921 - 401636 | 63504.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





