Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-dopachrome tautomerase-related protein | CE139_RS21625 | Not Available | Positive | 4695429 - 4696535 | 39451.8 |
| peptidoglycan dd-metalloendopeptidase family protein | CE139_RS21630 | Not Available | Positive | 4696612 - 4697433 | 29351.5 |
| hypothetical protein | CE139_RS21635 | Not Available | Positive | 4697529 - 4697735 | 7679.48 |
| duf6491 family protein | CE139_RS21640 | Not Available | Negative | 4697810 - 4698199 | 13953.0 |
| mechanosensitive ion channel family protein | CE139_RS21645 | Not Available | Positive | 4698312 - 4699592 | 47659.5 |
| glutathione s-transferase family protein | CE139_RS21650 | Not Available | Positive | 4699619 - 4700287 | 24833.0 |
| duf4174 domain-containing protein | CE139_RS21655 | Not Available | Negative | 4700541 - 4700972 | 15579.8 |
| 2-isopropylmalate synthase | CE139_RS21660 | Not Available | Positive | 4701336 - 4703006 | 61169.6 |
| eal domain-containing protein | CE139_RS21665 | Not Available | Positive | 4703147 - 4706452 | 121880.0 |
| aldo/keto reductase | CE139_RS21670 | Not Available | Positive | 4706504 - 4707454 | 34701.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





