Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr/gntr family transcriptional regulator | CE139_RS21575 | Not Available | Positive | 4685761 - 4686465 | 25472.1 |
| l-threonate dehydrogenase | CE139_RS21580 | Not Available | Positive | 4686488 - 4687381 | 30388.7 |
| 3-oxo-tetronate kinase | CE139_RS21585 | Not Available | Positive | 4687387 - 4688679 | 44450.2 |
| aldolase | CE139_RS21590 | Not Available | Positive | 4688676 - 4689314 | 22706.3 |
| slc13 family permease | CE139_RS21595 | Not Available | Positive | 4689454 - 4690914 | 50310.0 |
| 2-oxo-tetronate isomerase | CE139_RS21600 | Not Available | Positive | 4690930 - 4691709 | 28473.7 |
| sugar abc transporter atpase | CE139_RS21605 | Not Available | Negative | 4691935 - 4692486 | 20322.3 |
| exodeoxyribonuclease vii large subunit | CE139_RS21610 | Not Available | Positive | 4692589 - 4693968 | 51230.2 |
| purine-nucleoside phosphorylase | CE139_RS21615 | Not Available | Positive | 4694042 - 4695079 | 37928.0 |
| hypothetical protein | CE139_RS21620 | Not Available | Negative | 4695091 - 4695270 | 6157.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





