Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite exporter taue/safe family protein | CE139_RS21475 | Not Available | Negative | 4664160 - 4664930 | 27875.3 |
| sdr family oxidoreductase | CE139_RS21480 | Not Available | Negative | 4665031 - 4666095 | 39075.3 |
| lysr family transcriptional regulator | CE139_RS21485 | Not Available | Positive | 4666262 - 4667194 | 33868.9 |
| nad(p)-dependent alcohol dehydrogenase | CE139_RS21490 | Not Available | Positive | 4667444 - 4668511 | 38109.4 |
| neutral zinc metallopeptidase | CE139_RS21495 | Not Available | Positive | 4668630 - 4669490 | 30735.0 |
| alpha/beta hydrolase | CE139_RS21500 | Not Available | Positive | 4669510 - 4670511 | 35919.7 |
| atp-binding protein | CE139_RS21505 | Not Available | Negative | 4670514 - 4672691 | 80071.9 |
| had family hydrolase | CE139_RS21510 | Not Available | Negative | 4672796 - 4673383 | 21495.9 |
| haloacid dehalogenase type ii | CE139_RS21515 | Not Available | Positive | 4673484 - 4674227 | 26957.2 |
| catb-related o-acetyltransferase | CE139_RS21520 | Not Available | Positive | 4674282 - 4674908 | 22710.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





