Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS21425 | Not Available | Positive | 4651994 - 4652275 | 10290.5 |
| glutamine-hydrolyzing gmp synthase | CE139_RS21430 | Not Available | Negative | 4652303 - 4653880 | 57936.8 |
| imp dehydrogenase | CE139_RS21435 | Not Available | Negative | 4654009 - 4655478 | 51901.8 |
| tonb-dependent siderophore receptor | CE139_RS21440 | Not Available | Positive | 4655644 - 4657770 | 77542.2 |
| iron-siderophore abc transporter substrate-binding protein | CE139_RS21445 | Not Available | Positive | 4657902 - 4658846 | 33093.0 |
| feccd family abc transporter permease | CE139_RS21450 | Not Available | Positive | 4658906 - 4659883 | 32652.4 |
| feccd family abc transporter permease | CE139_RS21455 | Not Available | Positive | 4659880 - 4660893 | 34886.2 |
| abc transporter atp-binding protein | CE139_RS21460 | Not Available | Positive | 4660875 - 4661681 | 28917.1 |
| d-2-hydroxyacid dehydrogenase family protein | CE139_RS21465 | Not Available | Positive | 4661827 - 4662801 | 35481.6 |
| alpha/beta fold hydrolase | CE139_RS21470 | Not Available | Negative | 4662986 - 4663873 | 31874.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





