Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CE139_RS21375 | Not Available | Positive | 4641037 - 4642350 | 48270.1 |
| mfs transporter | CE139_RS21380 | Not Available | Negative | 4642347 - 4643507 | 40137.4 |
| gnat family n-acetyltransferase | CE139_RS21385 | Not Available | Negative | 4643507 - 4644040 | 19278.0 |
| lysr family transcriptional regulator | CE139_RS21390 | Not Available | Positive | 4644106 - 4645074 | 34744.4 |
| chromate efflux transporter | CE139_RS21395 | Not Available | Positive | 4645067 - 4646272 | 41774.5 |
| hypothetical protein | CE139_RS21400 | Not Available | Positive | 4646450 - 4647703 | 43622.2 |
| type 1 glutamine amidotransferase domain-containing protein | CE139_RS21405 | Not Available | Positive | 4647862 - 4648539 | 24017.1 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CE139_RS21410 | Not Available | Positive | 4648955 - 4650901 | 71518.2 |
| duf2857 domain-containing protein | CE139_RS21415 | Not Available | Negative | 4651278 - 4651495 | 7791.4 |
| pp_04279 | CE139_RS21420 | Not Available | Positive | 4651596 - 4651819 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





