Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal response regulator transcription factor | CE139_RS21325 | Not Available | Positive | 4625534 - 4626205 | 25539.3 |
| heavy metal sensor histidine kinase | CE139_RS21330 | Not Available | Positive | 4626202 - 4627584 | 49817.2 |
| duf4011 domain-containing protein | CE139_RS21335 | Not Available | Positive | 4627725 - 4632860 | 187930.0 |
| oprd family porin | CE139_RS21340 | Not Available | Negative | 4633408 - 4634763 | 48077.8 |
| dna/rna non-specific endonuclease | CE139_RS21345 | Not Available | Positive | 4634917 - 4635855 | 35059.3 |
| mfs transporter | CE139_RS21350 | Not Available | Negative | 4635852 - 4637033 | 40540.0 |
| tetr/acrr family transcriptional regulator | CE139_RS21355 | Not Available | Positive | 4637128 - 4637685 | 20427.8 |
| yrze family protein | CE139_RS21360 | Not Available | Negative | 4637783 - 4638796 | 35148.8 |
| nramp family divalent metal transporter | CE139_RS21365 | Not Available | Negative | 4638921 - 4640267 | 47741.0 |
| manganese-binding transcriptional regulator mntr | CE139_RS21370 | Not Available | Positive | 4640486 - 4640935 | 16581.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





