Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class v-fold plp-dependent enzyme | CE139_RS21275 | Not Available | Positive | 4615767 - 4616975 | 42835.2 |
| sufe family protein | CE139_RS21280 | Not Available | Positive | 4616972 - 4617370 | 14910.0 |
| trna adenosine(34) deaminase tada | CE139_RS21285 | Not Available | Negative | 4617367 - 4617870 | 18088.8 |
| atp-binding protein | CE139_RS21290 | Not Available | Positive | 4618120 - 4620342 | 81834.6 |
| lyse family translocator | CE139_RS21295 | Not Available | Positive | 4620545 - 4621132 | 20442.7 |
| arac family transcriptional regulator | CE139_RS21300 | Not Available | Negative | 4621118 - 4621945 | 30417.2 |
| nad(p)-dependent oxidoreductase | CE139_RS21305 | Not Available | Negative | 4622015 - 4622896 | 30377.5 |
| molybdopterin-dependent oxidoreductase | CE139_RS21310 | Not Available | Negative | 4623201 - 4623956 | 28665.2 |
| cytochrome b/b6 domain-containing protein | CE139_RS21315 | Not Available | Negative | 4623943 - 4624569 | 23174.9 |
| hypothetical protein | CE139_RS21320 | Not Available | Negative | 4624802 - 4625413 | 21359.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





