Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease e | CE139_RS21225 | Not Available | Positive | 4604496 - 4607774 | 123103.0 |
| 30s ribosomal protein s9 | CE139_RS21230 | Not Available | Negative | 4608492 - 4608884 | 14611.6 |
| 50s ribosomal protein l13 | CE139_RS21235 | Not Available | Negative | 4608900 - 4609328 | 16063.5 |
| deoxyribonuclease v | CE139_RS21240 | Not Available | Negative | 4609536 - 4610237 | 25059.3 |
| cell division protein zape | CE139_RS21245 | Not Available | Negative | 4610292 - 4611386 | 42181.9 |
| tryptophan--trna ligase | CE139_RS21250 | Not Available | Negative | 4611473 - 4612819 | 48503.9 |
| alpha/beta hydrolase | CE139_RS21255 | Not Available | Negative | 4612853 - 4613488 | 22674.3 |
| yhcb family protein | CE139_RS21260 | Not Available | Positive | 4613674 - 4614114 | 16217.1 |
| arsc family reductase | CE139_RS21265 | Not Available | Positive | 4614246 - 4614608 | 13471.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | CE139_RS21270 | Not Available | Positive | 4614682 - 4615716 | 35801.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





