Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | CE139_RS21175 | Not Available | Negative | 4596575 - 4596811 | 8741.13 |
| 3-oxoacyl-acp reductase fabg | CE139_RS21180 | Not Available | Negative | 4596980 - 4597723 | 25448.7 |
| acp s-malonyltransferase | CE139_RS21185 | Not Available | Negative | 4597739 - 4598674 | 32226.6 |
| phosphate acyltransferase plsx | CE139_RS21190 | Not Available | Negative | 4598757 - 4599746 | 35171.5 |
| 50s ribosomal protein l32 | CE139_RS21195 | Not Available | Negative | 4599753 - 4599935 | 6789.93 |
| yced family protein | CE139_RS21200 | Not Available | Negative | 4599946 - 4600473 | 19226.1 |
| maf family protein | CE139_RS21205 | Not Available | Positive | 4600573 - 4601151 | 21013.3 |
| signal peptide peptidase sppa | CE139_RS21210 | Not Available | Negative | 4601173 - 4602165 | 36454.6 |
| had-ia family hydrolase | CE139_RS21215 | Not Available | Negative | 4602158 - 4602844 | 24653.6 |
| 23s rrna pseudouridine(955/2504/2580) synthase rluc | CE139_RS21220 | Not Available | Negative | 4602837 - 4603790 | 35331.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





