Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | CE139_RS01710 | Not Available | Negative | 381217 - 382248 | 37595.1 |
| peptide deformylase | CE139_RS01715 | Not Available | Positive | 382478 - 382984 | 19228.2 |
| methionyl-trna formyltransferase | CE139_RS01720 | Not Available | Positive | 383043 - 383987 | 33041.1 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | CE139_RS01725 | Not Available | Positive | 383984 - 385285 | 46882.6 |
| hypothetical protein | CE139_RS01730 | Not Available | Positive | 385296 - 385613 | 11361.6 |
| pilz domain-containing protein | CE139_RS01735 | Not Available | Negative | 385604 - 385876 | 10159.2 |
| lysophospholipid acyltransferase | CE139_RS01740 | Not Available | Negative | 386045 - 386932 | 32912.3 |
| dna-3-methyladenine glycosylase i | CE139_RS01745 | Not Available | Negative | 387023 - 387607 | 22126.5 |
| glycine--trna ligase subunit alpha | CE139_RS01750 | Not Available | Positive | 387758 - 388723 | 36617.3 |
| glycine--trna ligase subunit beta | CE139_RS01755 | Not Available | Positive | 388723 - 390780 | 74325.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





