Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | CE139_RS21080 | Not Available | Negative | 4574676 - 4576985 | 85763.0 |
| hypothetical protein | CE139_RS21085 | Not Available | Negative | 4577586 - 4578284 | 24969.0 |
| frg domain-containing protein | CE139_RS21090 | Not Available | Negative | 4578556 - 4579434 | 32807.8 |
| hypothetical protein | CE139_RS21095 | Not Available | Negative | 4579577 - 4580137 | 20528.8 |
| 4-fold beta flower protein | CE139_RS21100 | Not Available | Positive | 4580865 - 4581236 | 13594.0 |
| duf2857 domain-containing protein | CE139_RS25900 | Not Available | Negative | 4581545 - 4581937 | 14344.7 |
| hypothetical protein | CE139_RS21105 | Not Available | Negative | 4581940 - 4582305 | 13605.5 |
| metallophosphoesterase | CE139_RS21110 | Not Available | Negative | 4582554 - 4583294 | 27307.1 |
| transcriptional regulator | CE139_RS21115 | Not Available | Positive | 4583495 - 4583968 | 16893.7 |
| hypothetical protein | CE139_RS21120 | Not Available | Positive | 4584033 - 4584938 | 33700.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





