Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein-ubiquinone oxidoreductase | CE139_RS20980 | Not Available | Positive | 4551341 - 4552990 | 60002.6 |
| duf1285 domain-containing protein | CE139_RS20985 | Not Available | Negative | 4553022 - 4553582 | 20954.9 |
| duf4823 domain-containing protein | CE139_RS20990 | Not Available | Negative | 4553594 - 4554208 | 23207.8 |
| gtp 3',8-cyclase moaa | CE139_RS20995 | Not Available | Negative | 4554296 - 4555264 | 35233.2 |
| tetr/acrr family transcriptional regulator | CE139_RS21000 | Not Available | Negative | 4555330 - 4555971 | 25232.1 |
| aminotransferase class v-fold plp-dependent enzyme | CE139_RS21005 | Not Available | Positive | 4556143 - 4557273 | 41666.8 |
| tatd family hydrolase | CE139_RS21010 | Not Available | Negative | 4557490 - 4558272 | 28185.6 |
| pilz domain-containing protein | CE139_RS21015 | Not Available | Negative | 4558328 - 4558684 | 12853.7 |
| dna polymerase iii subunit delta' | CE139_RS21020 | Not Available | Negative | 4558724 - 4559707 | 36024.1 |
| dtmp kinase | CE139_RS21025 | Not Available | Negative | 4559700 - 4560323 | 22599.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





