Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | CE139_RS20930 | Not Available | Negative | 4542369 - 4543286 | 32798.9 |
| orotidine-5'-phosphate decarboxylase | CE139_RS20935 | Not Available | Negative | 4543390 - 4544088 | 24360.7 |
| lysr family transcriptional regulator | CE139_RS20940 | Not Available | Negative | 4544179 - 4545054 | 31797.0 |
| multidrug/biocide efflux pace transporter | CE139_RS20945 | Not Available | Positive | 4545137 - 4545592 | 16789.9 |
| duf2897 family protein | CE139_RS20950 | Not Available | Positive | 4545641 - 4545808 | 6285.75 |
| gfo/idh/moca family protein | CE139_RS20955 | Not Available | Negative | 4545869 - 4546978 | 40172.6 |
| hypothetical protein | CE139_RS20960 | Not Available | Negative | 4547092 - 4547619 | 18246.7 |
| plp-dependent aminotransferase family protein | CE139_RS20965 | Not Available | Negative | 4547727 - 4549160 | 52521.7 |
| electron transfer flavoprotein subunit alpha/fixb family protein | CE139_RS20970 | Not Available | Negative | 4549366 - 4550295 | 31505.8 |
| electron transfer flavoprotein subunit beta/fixa family protein | CE139_RS20975 | Not Available | Negative | 4550295 - 4551047 | 26537.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





