Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CE139_RS20830 | Not Available | Positive | 4523125 - 4524048 | 33930.4 |
| hth-type transcriptional regulator cysb | CE139_RS20835 | Not Available | Negative | 4524373 - 4525347 | 36057.5 |
| universal stress protein | CE139_RS20840 | Not Available | Negative | 4525460 - 4525942 | 17472.3 |
| thioredoxin family protein | CE139_RS20845 | Not Available | Negative | 4526051 - 4526377 | 11439.0 |
| 3-deoxy-7-phosphoheptulonate synthase | CE139_RS20850 | Not Available | Positive | 4526543 - 4527622 | 39153.0 |
| gnat family n-acetyltransferase | CE139_RS20855 | Not Available | Negative | 4527864 - 4528145 | 10634.5 |
| lpp/opri family alanine-zipper lipoprotein | CE139_RS20860 | Not Available | Positive | 4528589 - 4528840 | 8765.19 |
| l,d-transpeptidase family protein | CE139_RS20865 | Not Available | Negative | 4528963 - 4529940 | 34833.1 |
| hypothetical protein | CE139_RS20870 | Not Available | Negative | 4530156 - 4530437 | 10392.0 |
| arylesterase | CE139_RS20875 | Not Available | Negative | 4530536 - 4531090 | 19879.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





