Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr/gntr family transcriptional regulator | CE139_RS20780 | Not Available | Positive | 4510697 - 4511452 | 28195.8 |
| fadr/gntr family transcriptional regulator | CE139_RS20785 | Not Available | Positive | 4511482 - 4512168 | 24660.6 |
| smp-30/gluconolactonase/lre family protein | CE139_RS20790 | Not Available | Positive | 4512251 - 4513120 | 31438.9 |
| substrate-binding domain-containing protein | CE139_RS20795 | Not Available | Positive | 4513342 - 4514346 | 35688.0 |
| l-arabinose abc transporter atp-binding protein arag | CE139_RS20800 | Not Available | Positive | 4514406 - 4515932 | 54799.0 |
| l-arabinose abc transporter permease arah | CE139_RS20805 | Not Available | Positive | 4515959 - 4516927 | 34174.2 |
| ilvd/edd family dehydratase | CE139_RS20810 | Not Available | Positive | 4517010 - 4518749 | 62171.0 |
| aldose epimerase family protein | CE139_RS20815 | Not Available | Positive | 4518873 - 4520021 | 41183.6 |
| aldehyde dehydrogenase (nadp(+)) | CE139_RS20820 | Not Available | Negative | 4520297 - 4521874 | 55434.4 |
| arad1 family protein | CE139_RS20825 | Not Available | Negative | 4522027 - 4523022 | 36384.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





