Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:proton antiporter | CE139_RS20680 | Not Available | Negative | 4487245 - 4488606 | 48804.4 |
| dead/deah box helicase | CE139_RS20685 | Not Available | Positive | 4488786 - 4491185 | 90120.3 |
| duf4442 domain-containing protein | CE139_RS20690 | Not Available | Negative | 4491540 - 4492007 | 17024.7 |
| sugar transporter | CE139_RS20695 | Not Available | Negative | 4492165 - 4493355 | 41936.7 |
| duf305 domain-containing protein | CE139_RS20700 | Not Available | Positive | 4493773 - 4494108 | 12336.0 |
| voc family protein | CE139_RS20705 | Not Available | Positive | 4494170 - 4494550 | 14178.1 |
| cap domain-containing protein | CE139_RS20710 | Not Available | Negative | 4494547 - 4495395 | 29755.6 |
| peptidylprolyl isomerase | CE139_RS20715 | Not Available | Positive | 4495549 - 4495830 | 9994.73 |
| gfa family protein | CE139_RS20720 | Not Available | Positive | 4495925 - 4496380 | 16596.7 |
| methyl-accepting chemotaxis protein | CE139_RS25550 | Not Available | Positive | 4496585 - 4498618 | 73862.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





