Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2857 domain-containing protein | CE139_RS01670 | Not Available | Negative | 372108 - 372457 | 13153.4 |
| hypothetical protein | CE139_RS01675 | Not Available | Positive | 372529 - 372993 | 16673.6 |
| shikimate dehydrogenase | CE139_RS01680 | Not Available | Negative | 373034 - 373849 | 28996.7 |
| oxygen-dependent coproporphyrinogen oxidase | CE139_RS01685 | Not Available | Negative | 373855 - 374784 | 34566.5 |
| nadph:quinone reductase | CE139_RS01690 | Not Available | Positive | 374928 - 375905 | 34437.3 |
| duf2857 domain-containing protein | CE139_RS25580 | Not Available | Positive | 377032 - 378546 | 57448.9 |
| duf2857 domain-containing protein | CE139_RS25585 | Not Available | Positive | 378562 - 378984 | 15227.2 |
| duf2857 domain-containing protein | CE139_RS25590 | Not Available | Positive | 379129 - 379446 | 11487.9 |
| l-threonylcarbamoyladenylate synthase | CE139_RS01700 | Not Available | Negative | 379455 - 380009 | 20234.6 |
| dna-processing protein dpra | CE139_RS01705 | Not Available | Negative | 380074 - 381159 | 38005.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





