Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase family protein | CE139_RS20630 | Not Available | Negative | 4477791 - 4478810 | 37154.6 |
| zn-dependent hydrolase | CE139_RS20635 | Not Available | Negative | 4478812 - 4480041 | 43419.3 |
| mfs transporter | CE139_RS20640 | Not Available | Negative | 4480058 - 4481353 | 46104.4 |
| lysr family transcriptional regulator | CE139_RS20645 | Not Available | Positive | 4481593 - 4482579 | 36605.0 |
| ion transporter | CE139_RS20650 | Not Available | Positive | 4482652 - 4483512 | 32073.8 |
| glutathione s-transferase family protein | CE139_RS20655 | Not Available | Negative | 4483528 - 4484151 | 23195.6 |
| dj-1/pfpi family protein | CE139_RS20660 | Not Available | Negative | 4484145 - 4484777 | 22456.2 |
| sensor domain-containing diguanylate cyclase | CE139_RS20665 | Not Available | Positive | 4485023 - 4486039 | 37808.5 |
| septal ring lytic transglycosylase rlpa family protein | CE139_RS20670 | Not Available | Negative | 4486046 - 4486444 | 14689.8 |
| paqr family membrane homeostasis protein trha | CE139_RS20675 | Not Available | Negative | 4486589 - 4487215 | 22894.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





