Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter substrate-binding domain-containing protein | CE139_RS20580 | Not Available | Negative | 4466024 - 4466830 | 29540.7 |
| sdr family nad(p)-dependent oxidoreductase | CE139_RS20585 | Not Available | Negative | 4466965 - 4467732 | 26911.9 |
| iclr family transcriptional regulator c-terminal domain-containing protein | CE139_RS20590 | Not Available | Negative | 4468119 - 4468913 | 29221.9 |
| nad-dependent succinate-semialdehyde dehydrogenase | CE139_RS20595 | Not Available | Negative | 4468977 - 4470431 | 51334.6 |
| aminotransferase | CE139_RS20600 | Not Available | Positive | 4470547 - 4471950 | 50716.2 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | CE139_RS20605 | Not Available | Negative | 4471993 - 4473531 | 56594.0 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | CE139_RS20610 | Not Available | Negative | 4473524 - 4474933 | 50606.4 |
| atp-nad kinase family protein | CE139_RS20615 | Not Available | Positive | 4475045 - 4476151 | 38572.3 |
| 3-hydroxyacyl-coa dehydrogenase | CE139_RS20620 | Not Available | Positive | 4476183 - 4477130 | 34330.3 |
| duf2857 domain-containing protein | CE139_RS20625 | Not Available | Positive | 4477609 - 4477752 | 5345.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





