Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | CE139_RS20480 | Not Available | Positive | 4447141 - 4447608 | 17102.5 |
| iclr family transcriptional regulator | CE139_RS20485 | Not Available | Negative | 4447605 - 4448435 | 29980.2 |
| abc transporter atp-binding protein | CE139_RS20490 | Not Available | Positive | 4448675 - 4449694 | 37164.9 |
| abc transporter permease | CE139_RS20495 | Not Available | Positive | 4449691 - 4450557 | 31317.8 |
| abc transporter permease | CE139_RS20500 | Not Available | Positive | 4450562 - 4451356 | 28335.5 |
| (2fe-2s)-binding protein | CE139_RS20505 | Not Available | Positive | 4451374 - 4451664 | 10350.4 |
| nad(p)/fad-dependent oxidoreductase | CE139_RS20510 | Not Available | Positive | 4451661 - 4453022 | 48046.6 |
| nad(p)/fad-dependent oxidoreductase | CE139_RS20515 | Not Available | Positive | 4453019 - 4454155 | 39712.4 |
| abc transporter substrate-binding protein | CE139_RS20520 | Not Available | Positive | 4454146 - 4455174 | 36950.5 |
| cupin domain-containing protein | CE139_RS20525 | Not Available | Positive | 4455277 - 4455624 | 13147.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





