Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleotide-diphosphate reductase subunit beta | CE139_RS20430 | Not Available | Positive | 4436825 - 4438075 | 47475.1 |
| hypothetical protein | CE139_RS20435 | Not Available | Positive | 4438163 - 4438981 | 30530.7 |
| hypothetical protein | CE139_RS20440 | Not Available | Positive | 4438985 - 4439965 | 37897.5 |
| hypothetical protein | CE139_RS20445 | Not Available | Positive | 4440158 - 4441207 | 38781.4 |
| ggdef domain-containing protein | CE139_RS20450 | Not Available | Positive | 4441399 - 4442532 | 40975.0 |
| gnat family n-acetyltransferase | CE139_RS20455 | Not Available | Positive | 4442581 - 4443036 | 16685.9 |
| rep-associated tyrosine transposase | CE139_RS20460 | Not Available | Positive | 4443876 - 4444406 | 20978.8 |
| lysr family transcriptional regulator | CE139_RS20465 | Not Available | Negative | 4444493 - 4445368 | 31712.5 |
| sdr family nad(p)-dependent oxidoreductase | CE139_RS20470 | Not Available | Positive | 4445545 - 4446303 | 26935.1 |
| class i sam-dependent dna methyltransferase | CE139_RS20475 | Not Available | Negative | 4446300 - 4447043 | 27618.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





