Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2857 domain-containing protein | CE139_RS20380 | Not Available | Negative | 4424513 - 4424954 | 16286.5 |
| phosphohistidine phosphatase sixa | CE139_RS20385 | Not Available | Negative | 4424975 - 4425430 | 16476.9 |
| duf4389 domain-containing protein | CE139_RS20390 | Not Available | Negative | 4425427 - 4425726 | 10939.5 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | CE139_RS20395 | Not Available | Negative | 4425758 - 4426780 | 36231.1 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase faba | CE139_RS20400 | Not Available | Positive | 4427014 - 4427529 | 18811.8 |
| beta-ketoacyl-acp synthase i | CE139_RS20405 | Not Available | Positive | 4427541 - 4428758 | 42842.0 |
| sugar mfs transporter | CE139_RS20410 | Not Available | Positive | 4429013 - 4430227 | 42933.8 |
| dicarboxylate/amino acid:cation symporter | CE139_RS20415 | Not Available | Negative | 4430665 - 4432014 | 47681.8 |
| 4'-phosphopantetheinyl transferase | CE139_RS20420 | Not Available | Positive | 4432390 - 4433130 | 26859.3 |
| ribonucleoside-diphosphate reductase subunit alpha | CE139_RS20425 | Not Available | Positive | 4433736 - 4436651 | 107934.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





