Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramic acid 6-phosphate phosphatase mupp | CE139_RS20335 | Not Available | Positive | 4415223 - 4415894 | 24665.8 |
| ycik family oxidoreductase | CE139_RS20340 | Not Available | Positive | 4415903 - 4416637 | 25308.4 |
| methyl-accepting chemotaxis protein | CE139_RS25890 | Not Available | Negative | 4416647 - 4417510 | 29653.0 |
| duf2857 domain-containing protein | CE139_RS25895 | Not Available | Negative | 4417532 - 4418797 | 45148.8 |
| hypothetical protein | CE139_RS20350 | Not Available | Negative | 4418748 - 4419038 | 10127.2 |
| trna 2-selenouridine(34) synthase mnmh | CE139_RS20355 | Not Available | Negative | 4419117 - 4420217 | 41002.8 |
| selenide, water dikinase seld | CE139_RS20360 | Not Available | Negative | 4420217 - 4421251 | 36555.9 |
| cynx/nimt family mfs transporter | CE139_RS20365 | Not Available | Positive | 4421595 - 4422785 | 41223.9 |
| duf4892 domain-containing protein | CE139_RS20370 | Not Available | Negative | 4422782 - 4423591 | 29188.2 |
| alpha/beta fold hydrolase | CE139_RS20375 | Not Available | Negative | 4423598 - 4424479 | 31183.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





