Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 4403782 - 4403858 | Not Available |
| arc family dna-binding protein | CE139_RS20290 | Not Available | Positive | 4404117 - 4404431 | 11726.9 |
| magnesium transporter | CE139_RS20295 | Not Available | Negative | 4404483 - 4405928 | 53069.4 |
| duf4124 domain-containing protein | CE139_RS20300 | Not Available | Positive | 4406217 - 4406693 | 17047.5 |
| prephenate dehydratase | CE139_RS20305 | Not Available | Negative | 4406718 - 4407812 | 40466.4 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | CE139_RS20310 | Not Available | Negative | 4407815 - 4408900 | 39818.3 |
| dna gyrase subunit a | CE139_RS20315 | Not Available | Negative | 4408900 - 4411737 | 104850.0 |
| s-methyl-5-thioribose-1-phosphate isomerase | CE139_RS20320 | Not Available | Negative | 4411971 - 4413044 | 38451.4 |
| trz/atz family hydrolase | CE139_RS20325 | Not Available | Positive | 4413163 - 4414488 | 47904.7 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | CE139_RS20330 | Not Available | Positive | 4414521 - 4415219 | 25942.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





