Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagella synthesis protein flgn | CE139_RS20235 | Not Available | Positive | 4394212 - 4394682 | 16731.0 |
| flagellar brake protein | CE139_RS20240 | Not Available | Positive | 4394771 - 4395505 | 27752.9 |
| mfs transporter | CE139_RS20245 | Not Available | Negative | 4395548 - 4396903 | 48146.3 |
| glycosyltransferase family 2 protein | CE139_RS20250 | Not Available | Negative | 4396948 - 4397796 | 31342.7 |
| smr family transporter | CE139_RS20255 | Not Available | Negative | 4397810 - 4398166 | 12441.9 |
| sugar phosphate isomerase/epimerase family protein | CE139_RS20260 | Not Available | Negative | 4398163 - 4398996 | 29944.7 |
| nad(p)-dependent oxidoreductase | CE139_RS20265 | Not Available | Negative | 4398996 - 4399784 | 28595.8 |
| hypothetical protein | CE139_RS20270 | Not Available | Negative | 4399790 - 4401421 | 59425.1 |
| fad-dependent oxidoreductase | CE139_RS20275 | Not Available | Negative | 4401402 - 4402466 | 40367.0 |
| glycosyltransferase | CE139_RS20280 | Not Available | Negative | 4402514 - 4403536 | 37272.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





