Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate cytidylyltransferase | CE139_RS20135 | Not Available | Negative | 4374158 - 4374931 | 29351.9 |
| tigr02466 family protein | CE139_RS20140 | Not Available | Negative | 4374973 - 4375623 | 23606.6 |
| flagellar hook-associated protein 3 | CE139_RS20145 | Not Available | Negative | 4375641 - 4377230 | 55832.9 |
| flagellar hook-associated protein flgk | CE139_RS20150 | Not Available | Negative | 4377243 - 4379252 | 68319.8 |
| flagellar assembly peptidoglycan hydrolase flgj | CE139_RS20155 | Not Available | Negative | 4379262 - 4380533 | 44828.3 |
| flagellar basal body p-ring protein flgi | CE139_RS20160 | Not Available | Negative | 4380547 - 4381650 | 37985.8 |
| flagellar basal body l-ring protein flgh | CE139_RS20165 | Not Available | Negative | 4381662 - 4382357 | 24234.7 |
| flagellar basal-body rod protein flgg | CE139_RS20170 | Not Available | Negative | 4382384 - 4383169 | 27623.4 |
| flagellar basal body rod protein flgf | CE139_RS20175 | Not Available | Negative | 4383216 - 4383956 | 26266.1 |
| flagellar hook protein flge | CE139_RS20180 | Not Available | Negative | 4384107 - 4385417 | 44737.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





