Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate dehydrogenase | CE139_RS20030 | Not Available | Negative | 4346555 - 4348111 | 58274.6 |
| phosphogluconate dehydrogenase (nad(+)-dependent, decarboxylating) | CE139_RS20035 | Not Available | Negative | 4348195 - 4349172 | 35052.8 |
| bifunctional transaldolase/phosoglucose isomerase | CE139_RS20040 | Not Available | Negative | 4349191 - 4352010 | 101273.0 |
| transketolase | CE139_RS20045 | Not Available | Negative | 4352007 - 4354091 | 75220.1 |
| sigma-54-dependent transcriptional regulator | CE139_RS20050 | Not Available | Negative | 4354334 - 4355716 | 49986.5 |
| sensor histidine kinase | CE139_RS20055 | Not Available | Negative | 4355713 - 4356912 | 43093.2 |
| ykgj family cysteine cluster protein | CE139_RS20060 | Not Available | Positive | 4357337 - 4358089 | 27730.2 |
| transposase | CE139_RS20070 | Not Available | Negative | 4358640 - 4358954 | 11865.3 |
| sigma-54 dependent transcriptional regulator | CE139_RS20075 | Not Available | Negative | 4359089 - 4360567 | 55748.1 |
| flagellar protein flit | CE139_RS20080 | Not Available | Negative | 4360732 - 4361028 | 10747.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





