Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate thymidylyltransferase rfba | CE139_RS19885 | Not Available | Negative | 4316096 - 4316977 | 32246.7 |
| dtdp-glucose 4,6-dehydratase | CE139_RS19890 | Not Available | Negative | 4317050 - 4318114 | 39598.6 |
| polysaccharide biosynthesis protein | CE139_RS19895 | Not Available | Negative | 4318336 - 4320318 | 73267.2 |
| mray family glycosyltransferase | CE139_RS19900 | Not Available | Negative | 4320329 - 4321375 | 36639.0 |
| nad-dependent epimerase/dehydratase family protein | CE139_RS19905 | Not Available | Negative | 4321375 - 4322349 | 34440.0 |
| hypothetical protein | CE139_RS19910 | Not Available | Positive | 4322339 - 4322887 | 19794.4 |
| integration host factor subunit beta | CE139_RS19915 | Not Available | Negative | 4322956 - 4323243 | 10761.0 |
| 30s ribosomal protein s1 | CE139_RS19920 | Not Available | Negative | 4323432 - 4325111 | 61687.1 |
| (d)cmp kinase | CE139_RS19925 | Not Available | Negative | 4325252 - 4325938 | 24607.2 |
| duf2857 domain-containing protein | CE139_RS19930 | Not Available | Negative | 4325962 - 4326882 | 32851.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





