Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpt domain-containing protein | CE139_RS19835 | Not Available | Negative | 4307946 - 4308302 | 13174.8 |
| flagellar export protein flij | CE139_RS19840 | Not Available | Negative | 4308348 - 4308791 | 17603.8 |
| flagellar protein export atpase flii | CE139_RS19845 | Not Available | Negative | 4308798 - 4310144 | 48490.0 |
| flagellar assembly protein flih | CE139_RS19850 | Not Available | Negative | 4310134 - 4310913 | 28923.1 |
| flagellar motor switch protein flig | CE139_RS19855 | Not Available | Negative | 4310981 - 4311991 | 36454.9 |
| flagellar basal-body ms-ring/collar protein flif | CE139_RS19860 | Not Available | Negative | 4311978 - 4313786 | 64336.2 |
| flagellar hook-basal body complex protein flie | CE139_RS19865 | Not Available | Negative | 4313801 - 4314142 | 12131.8 |
| comea family dna-binding protein | CE139_RS19870 | Not Available | Negative | 4314287 - 4314589 | 10555.9 |
| dtdp-4-dehydrorhamnose reductase | CE139_RS19875 | Not Available | Negative | 4314649 - 4315563 | 32796.8 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | CE139_RS19880 | Not Available | Negative | 4315560 - 4316096 | 20166.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





