Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CE139_RS01565 | Not Available | Positive | 351844 - 353469 | 57825.5 |
| had hydrolase-like protein | CE139_RS01570 | Not Available | Positive | 353567 - 354199 | 23238.1 |
| duf2141 domain-containing protein | CE139_RS01575 | Not Available | Positive | 354210 - 354620 | 14891.9 |
| tryptophan synthase subunit alpha | CE139_RS01580 | Not Available | Negative | 355353 - 356159 | 28080.6 |
| tryptophan synthase subunit beta | CE139_RS01585 | Not Available | Negative | 356156 - 357364 | 43945.7 |
| lysr family transcriptional regulator | CE139_RS01590 | Not Available | Positive | 357457 - 358353 | 32662.4 |
| yqjd family protein | CE139_RS01595 | Not Available | Negative | 358393 - 358716 | 11666.6 |
| dodecin | CE139_RS01600 | Not Available | Positive | 358936 - 359151 | 7948.36 |
| duf1161 domain-containing protein | CE139_RS01605 | Not Available | Positive | 359196 - 359423 | 7699.28 |
| no-inducible flavohemoprotein | CE139_RS01610 | Not Available | Negative | 359511 - 360680 | 42756.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





