Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3742 family protein | CE139_RS25885 | Not Available | Negative | 4252744 - 4253130 | 13948.2 |
| mobh family relaxase | CE139_RS19545 | Not Available | Positive | 4253450 - 4255312 | 68546.7 |
| tyrosine-type recombinase/integrase | CE139_RS19550 | Not Available | Positive | 4255309 - 4256700 | 53243.8 |
| Trna-lys | Not Available | Not Available | Positive | 4256983 - 4257058 | Not Available |
| 7-cyano-7-deazaguanine synthase quec | CE139_RS19560 | Not Available | Negative | 4257119 - 4257793 | 23849.4 |
| 7-carboxy-7-deazaguanine synthase quee | CE139_RS19565 | Not Available | Negative | 4257796 - 4258446 | 24174.8 |
| tol-pal system protein ybgf | CE139_RS19570 | Not Available | Negative | 4258518 - 4259345 | 28620.6 |
| peptidoglycan-associated lipoprotein pal | CE139_RS19575 | Not Available | Negative | 4259352 - 4259873 | 18140.4 |
| tol-pal system beta propeller repeat protein tolb | CE139_RS19580 | Not Available | Negative | 4259933 - 4261231 | 47424.2 |
| cell envelope integrity protein tola | CE139_RS19585 | Not Available | Negative | 4261228 - 4262334 | 40349.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





