Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS19445 | Not Available | Positive | 4234889 - 4235218 | 12139.4 |
| raqprd family integrative conjugative element protein | CE139_RS19450 | Not Available | Positive | 4235383 - 4235679 | 10586.4 |
| tigr03758 family integrating conjugative element protein | CE139_RS19455 | Not Available | Positive | 4235676 - 4235915 | 8514.52 |
| tigr03745 family integrating conjugative element membrane protein | CE139_RS19460 | Not Available | Positive | 4235935 - 4236300 | 12725.0 |
| tigr03750 family conjugal transfer protein | CE139_RS19465 | Not Available | Positive | 4236316 - 4236696 | 14100.5 |
| pfl_4703 family integrating conjugative element protein | CE139_RS19470 | Not Available | Positive | 4236693 - 4237349 | 24579.2 |
| tigr03749 family integrating conjugative element protein | CE139_RS19475 | Not Available | Positive | 4237346 - 4238263 | 32623.1 |
| tigr03752 family integrating conjugative element protein | CE139_RS19480 | Not Available | Positive | 4238247 - 4239767 | 52643.0 |
| duf2857 domain-containing protein | CE139_RS25880 | Not Available | Positive | 4239802 - 4239920 | 4139.93 |
| conjugative transfer atpase | CE139_RS19485 | Not Available | Positive | 4240074 - 4243118 | 112860.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





