Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar porter family mfs transporter | CE139_RS19345 | Not Available | Positive | 4214057 - 4215475 | 51002.2 |
| fad-dependent oxidoreductase | CE139_RS19350 | Not Available | Negative | 4215694 - 4217253 | 55942.4 |
| marr family winged helix-turn-helix transcriptional regulator | CE139_RS19355 | Not Available | Positive | 4217301 - 4217777 | 17440.2 |
| duf2857 domain-containing protein | CE139_RS19360 | Not Available | Positive | 4218156 - 4218883 | 26598.0 |
| y-family dna polymerase | CE139_RS19365 | Not Available | Negative | 4219144 - 4220412 | 47553.5 |
| lexa family protein | CE139_RS19370 | Not Available | Negative | 4220405 - 4220839 | 16023.4 |
| hypothetical protein | CE139_RS19375 | Not Available | Positive | 4220947 - 4221156 | 8172.26 |
| hypothetical protein | CE139_RS19380 | Not Available | Positive | 4221305 - 4221583 | 10233.4 |
| methyl-accepting chemotaxis protein | CE139_RS19385 | Not Available | Positive | 4221698 - 4222402 | 25301.2 |
| tigr03759 family integrating conjugative element protein | CE139_RS19390 | Not Available | Positive | 4222415 - 4223167 | 27366.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





