Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CE139_RS19255 | Not Available | Positive | 4194189 - 4194419 | 8554.41 |
| carbon-nitrogen hydrolase family protein | CE139_RS19260 | Not Available | Negative | 4194416 - 4195144 | 26349.5 |
| hypothetical protein | CE139_RS25165 | Not Available | Negative | 4195839 - 4196063 | 8324.4 |
| hypothetical protein | CE139_RS19265 | Not Available | Negative | 4196663 - 4196884 | 8218.07 |
| methyl-accepting chemotaxis protein | CE139_RS25870 | Not Available | Negative | 4197118 - 4197726 | 21476.4 |
| pas domain-containing protein | CE139_RS25875 | Not Available | Negative | 4197748 - 4198434 | 26408.9 |
| duf2857 domain-containing protein | CE139_RS19275 | Not Available | Positive | 4198919 - 4200074 | 40577.0 |
| zinc-binding alcohol dehydrogenase family protein | CE139_RS19280 | Not Available | Negative | 4200310 - 4201251 | 32631.3 |
| multiple monosaccharide abc transporter permease | CE139_RS19285 | Not Available | Negative | 4201668 - 4202867 | 41832.9 |
| multiple monosaccharide abc transporter atp-binding protein | CE139_RS19290 | Not Available | Negative | 4202864 - 4204399 | 56280.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





