Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS19205 | Not Available | Negative | 4182847 - 4183272 | 14916.6 |
| toxin co-regulated pilus biosynthesis q family protein | CE139_RS25425 | Not Available | Negative | 4183269 - 4183556 | 10779.7 |
| duf2857 domain-containing protein | CE139_RS19215 | Not Available | Negative | 4183805 - 4184540 | 25920.7 |
| catalase family protein | CE139_RS19220 | Not Available | Positive | 4184898 - 4185998 | 39343.8 |
| hamp domain-containing protein | CE139_RS19225 | Not Available | Positive | 4186857 - 4187729 | 31711.1 |
| pp_03838 | CE139_RS19230 | Not Available | Positive | 4187830 - 4188053 | Not Available |
| patatin-like phospholipase family protein | CE139_RS19235 | Not Available | Negative | 4188317 - 4189513 | 44198.4 |
| mov34/mpn/pad-1 family protein | CE139_RS19240 | Not Available | Negative | 4189506 - 4191722 | 81897.7 |
| hypothetical protein | CE139_RS19245 | Not Available | Negative | 4191725 - 4192873 | 43737.7 |
| recombinase family protein | CE139_RS19250 | Not Available | Positive | 4193126 - 4194052 | 34508.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





