Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase family protein | CE139_RS19060 | Not Available | Negative | 4145940 - 4146614 | 24072.2 |
| abc transporter atp-binding protein | CE139_RS19065 | Not Available | Negative | 4146611 - 4148143 | 54845.4 |
| cysteine hydrolase family protein | CE139_RS19070 | Not Available | Negative | 4148147 - 4148836 | 24565.7 |
| formamidase | CE139_RS19075 | Not Available | Negative | 4148840 - 4149847 | 36795.0 |
| abc transporter permease | CE139_RS19080 | Not Available | Negative | 4149860 - 4150780 | 32174.9 |
| abc transporter permease | CE139_RS19085 | Not Available | Negative | 4150773 - 4151885 | 38195.8 |
| bmp family abc transporter substrate-binding protein | CE139_RS19090 | Not Available | Negative | 4151893 - 4153002 | 39689.8 |
| allophanate hydrolase | CE139_RS19095 | Not Available | Negative | 4153029 - 4154816 | 63509.9 |
| had family hydrolase | CE139_RS19100 | Not Available | Negative | 4155039 - 4155698 | 24230.9 |
| sodium:solute symporter | CE139_RS19105 | Not Available | Negative | 4155765 - 4157303 | 54688.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





