Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | CE139_RS19010 | Not Available | Negative | 4137949 - 4138983 | 38726.3 |
| duf1852 domain-containing protein | CE139_RS19015 | Not Available | Negative | 4139011 - 4139994 | 37539.9 |
| duf2857 domain-containing protein | CE139_RS19020 | Not Available | Negative | 4140485 - 4140805 | 12022.4 |
| hypothetical protein | CE139_RS19025 | Not Available | Negative | 4141541 - 4141840 | 10732.8 |
| hypothetical protein | CE139_RS19030 | Not Available | Negative | 4141921 - 4142208 | 10468.1 |
| hypothetical protein | CE139_RS19035 | Not Available | Negative | 4142208 - 4142783 | 21430.3 |
| hypothetical protein | CE139_RS19040 | Not Available | Positive | 4142931 - 4143497 | 20773.1 |
| hypothetical protein | CE139_RS19045 | Not Available | Positive | 4143476 - 4144060 | 21580.9 |
| gntr family transcriptional regulator | CE139_RS19050 | Not Available | Negative | 4144828 - 4145532 | 27712.4 |
| oxalurate catabolism protein hpxz | CE139_RS19055 | Not Available | Negative | 4145536 - 4145943 | 14757.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





