Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | CE139_RS18960 | Not Available | Negative | 4125261 - 4125629 | 12830.6 |
| response regulator | CE139_RS18965 | Not Available | Negative | 4125810 - 4126193 | 13818.8 |
| pas domain-containing sensor histidine kinase | CE139_RS18970 | Not Available | Positive | 4126728 - 4128827 | 78152.4 |
| response regulator | CE139_RS18975 | Not Available | Positive | 4128881 - 4129270 | 14409.4 |
| atp-binding protein | CE139_RS18980 | Not Available | Negative | 4129913 - 4132381 | 91241.1 |
| hypothetical protein | CE139_RS18985 | Not Available | Positive | 4133534 - 4133734 | 7536.03 |
| hypothetical protein | CE139_RS18990 | Not Available | Positive | 4133743 - 4133904 | 6450.6 |
| atp-binding protein | CE139_RS18995 | Not Available | Positive | 4134236 - 4135429 | 43046.5 |
| hypothetical protein | CE139_RS19000 | Not Available | Negative | 4136302 - 4137237 | 34971.1 |
| flavin reductase family protein | CE139_RS19005 | Not Available | Negative | 4137436 - 4137945 | 18506.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





