Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | CE139_RS18910 | Not Available | Negative | 4111725 - 4115354 | 128529.0 |
| pilx n-terminal domain-containing pilus assembly protein | CE139_RS18915 | Not Available | Negative | 4115351 - 4115944 | 20386.3 |
| pilw family protein | CE139_RS18920 | Not Available | Negative | 4115941 - 4116666 | 25600.7 |
| type iv pilus modification protein pilv | CE139_RS18925 | Not Available | Negative | 4116663 - 4117247 | 20067.3 |
| gsph/fimt family pseudopilin | CE139_RS18930 | Not Available | Negative | 4117244 - 4117759 | 17378.9 |
| response regulator | CE139_RS18935 | Not Available | Positive | 4118375 - 4119109 | 27490.5 |
| hypothetical protein | CE139_RS18940 | Not Available | Positive | 4119896 - 4120033 | 4134.32 |
| glycoside hydrolase family 5 protein | CE139_RS18945 | Not Available | Negative | 4121106 - 4122155 | 38199.1 |
| duf2857 domain-containing protein | CE139_RS18950 | Not Available | Positive | 4122625 - 4123052 | 15165.9 |
| is3 family transposase | CE139_RS18955 | Not Available | Positive | 4123398 - 4124771 | 53028.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





