Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe(3+)-hydroxamate abc transporter permease fhub | CE139_RS18860 | Not Available | Positive | 4083047 - 4085041 | 68401.3 |
| alpha/beta hydrolase | CE139_RS18865 | Not Available | Negative | 4084996 - 4085940 | 33330.7 |
| non-ribosomal peptide synthetase | CE139_RS18870 | Not Available | Negative | 4085972 - 4091584 | 204916.0 |
| non-ribosomal peptide synthetase | CE139_RS18875 | Not Available | Negative | 4091685 - 4101856 | 369880.0 |
| non-ribosomal peptide synthetase | CE139_RS18880 | Not Available | Negative | 4101853 - 4107072 | 188386.0 |
| taud/tfda family dioxygenase | CE139_RS18885 | Not Available | Negative | 4107122 - 4108108 | 37210.0 |
| thioesterase ii family protein | CE139_RS18890 | Not Available | Negative | 4108105 - 4108830 | 26145.4 |
| mbth family protein | CE139_RS18895 | Not Available | Negative | 4108834 - 4109049 | 8255.55 |
| rna polymerase factor sigma-70 | CE139_RS18900 | Not Available | Positive | 4109312 - 4109863 | 21082.0 |
| type iv pilin protein | CE139_RS18905 | Not Available | Negative | 4111282 - 4111713 | 15215.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





