Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| siderophore-iron reductase fhuf | CE139_RS18810 | Not Available | Negative | 4070429 - 4071172 | 27632.7 |
| atp-binding cassette domain-containing protein | CE139_RS18815 | Not Available | Positive | 4071454 - 4072221 | 27982.9 |
| gnat family n-acetyltransferase | CE139_RS18820 | Not Available | Negative | 4072251 - 4073234 | 37960.1 |
| alpha/beta hydrolase | CE139_RS18825 | Not Available | Negative | 4073291 - 4074583 | 46846.3 |
| lysine n(6)-hydroxylase/l-ornithine n(5)-oxygenase family protein | CE139_RS18830 | Not Available | Negative | 4074645 - 4075985 | 50138.4 |
| sigma-70 family rna polymerase sigma factor | CE139_RS18835 | Not Available | Negative | 4076149 - 4076622 | 17970.6 |
| fecr family protein | CE139_RS18840 | Not Available | Positive | 4076744 - 4077694 | 35152.1 |
| cyclic peptide export abc transporter | CE139_RS18845 | Not Available | Positive | 4077824 - 4079500 | 62093.6 |
| tonb-dependent siderophore receptor | CE139_RS18850 | Not Available | Positive | 4079619 - 4082078 | 89503.4 |
| abc transporter substrate-binding protein | CE139_RS18855 | Not Available | Positive | 4082161 - 4083054 | 32164.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





