Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | CE139_RS18765 | Not Available | Positive | 4060093 - 4060680 | 21964.5 |
| duf3509 domain-containing protein | CE139_RS25855 | Not Available | Negative | 4060778 - 4061074 | 10631.6 |
| hypothetical protein | CE139_RS18775 | Not Available | Negative | 4061406 - 4061612 | 7538.2 |
| hypothetical protein | CE139_RS18780 | Not Available | Negative | 4061663 - 4061845 | 6527.05 |
| hypothetical protein | CE139_RS18785 | Not Available | Negative | 4062293 - 4063498 | 44743.7 |
| duf2857 domain-containing protein | CE139_RS25860 | Not Available | Positive | 4064184 - 4064870 | 26330.5 |
| methyl-accepting chemotaxis protein | CE139_RS25865 | Not Available | Positive | 4065000 - 4065410 | 14234.9 |
| hypothetical protein | CE139_RS18795 | Not Available | Positive | 4065620 - 4065841 | 8050.93 |
| atp-dependent nuclease | CE139_RS18800 | Not Available | Positive | 4066273 - 4068408 | 78675.1 |
| uvrd-helicase domain-containing protein | CE139_RS18805 | Not Available | Positive | 4068409 - 4070205 | 67557.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





