Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2857 domain-containing protein | CE139_RS25570 | Not Available | Positive | 333469 - 333945 | 16523.5 |
| universal stress protein | CE139_RS01475 | Not Available | Positive | 334027 - 334455 | 15353.7 |
| exodeoxyribonuclease iii | CE139_RS01480 | Not Available | Negative | 334514 - 335293 | 29950.5 |
| orotate phosphoribosyltransferase | CE139_RS01485 | Not Available | Positive | 335374 - 336015 | 23210.9 |
| duf4124 domain-containing protein | CE139_RS01490 | Not Available | Positive | 336040 - 336636 | 21967.2 |
| gntr family transcriptional regulator | CE139_RS01495 | Not Available | Positive | 336829 - 337494 | 24984.1 |
| urea carboxylase-associated family protein | CE139_RS01500 | Not Available | Positive | 337510 - 338361 | 32121.9 |
| acetylglutamate kinase | CE139_RS01505 | Not Available | Negative | 338424 - 339326 | 31874.2 |
| phosphomannomutase/phosphoglucomutase | CE139_RS25110 | Not Available | Negative | 339401 - 340795 | 50472.3 |
| dutp diphosphatase | CE139_RS01515 | Not Available | Negative | 342008 - 342463 | 16108.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





