Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abrb/maze/spovt family dna-binding domain-containing protein | CE139_RS18670 | Not Available | Positive | 4044805 - 4045050 | 9091.85 |
| hypothetical protein | CE139_RS18675 | Not Available | Negative | 4045279 - 4045734 | 15768.1 |
| antitoxin xre/mbca/pars toxin-binding domain-containing protein | CE139_RS18680 | Not Available | Positive | 4046439 - 4046906 | 17804.6 |
| isncy family transposase | CE139_RS18685 | Not Available | Positive | 4047083 - 4048492 | 53867.6 |
| molybdopterin-binding protein | CE139_RS18690 | Not Available | Negative | 4048990 - 4049418 | 14602.8 |
| molybdate abc transporter substrate-binding protein | CE139_RS18695 | Not Available | Positive | 4049558 - 4050313 | 26505.6 |
| duf2857 domain-containing protein | CE139_RS25405 | Not Available | Positive | 4050432 - 4050767 | 12434.6 |
| duf2857 domain-containing protein | CE139_RS25410 | Not Available | Positive | 4050927 - 4051337 | 14797.7 |
| duf2857 domain-containing protein | CE139_RS18710 | Not Available | Negative | 4051621 - 4052229 | 22313.0 |
| hypothetical protein | CE139_RS18715 | Not Available | Negative | 4052241 - 4052708 | 17301.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





