Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine abc transporter permease glnp | CE139_RS18620 | Not Available | Positive | 4033264 - 4033920 | 23912.3 |
| glutamine abc transporter atp-binding protein glnq | CE139_RS18625 | Not Available | Positive | 4033917 - 4034639 | 26433.2 |
| c45 family autoproteolytic acyltransferase/hydolase | CE139_RS18630 | Not Available | Positive | 4034652 - 4035689 | 36413.1 |
| murr/rpir family transcriptional regulator | CE139_RS18635 | Not Available | Positive | 4035700 - 4036605 | 31770.1 |
| dna replication terminus site-binding protein | CE139_RS18640 | Not Available | Positive | 4036939 - 4037907 | 35978.1 |
| hypothetical protein | CE139_RS18645 | Not Available | Positive | 4039536 - 4040588 | 39820.2 |
| is21-like element helper atpase istb | CE139_RS18650 | Not Available | Negative | 4041157 - 4041939 | 29019.2 |
| is21 family transposase | CE139_RS18655 | Not Available | Negative | 4041936 - 4042961 | 38383.4 |
| hypothetical protein | CE139_RS18660 | Not Available | Negative | 4043187 - 4043633 | 16622.8 |
| helix-turn-helix domain-containing protein | CE139_RS18665 | Not Available | Positive | 4044419 - 4044652 | 8579.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





