Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replicative dna helicase | CE139_RS18520 | Not Available | Positive | 4016105 - 4017517 | 51829.3 |
| hypothetical protein | CE139_RS18525 | Not Available | Positive | 4017514 - 4017945 | 15696.6 |
| hypothetical protein | CE139_RS18530 | Not Available | Positive | 4017947 - 4018342 | 14592.5 |
| hypothetical protein | CE139_RS18535 | Not Available | Positive | 4018339 - 4018578 | 8799.66 |
| arc family dna-binding protein | CE139_RS25535 | Not Available | Positive | 4018575 - 4018853 | 10300.3 |
| parb family protein | CE139_RS18545 | Not Available | Positive | 4018850 - 4020598 | 64243.2 |
| sty4526/ypo1902 family pathogenicity island replication protein | CE139_RS18550 | Not Available | Positive | 4020672 - 4021231 | 21464.1 |
| helix-turn-helix domain-containing protein | CE139_RS18555 | Not Available | Positive | 4021332 - 4021791 | 17477.1 |
| lysr substrate-binding domain-containing protein | CE139_RS18560 | Not Available | Negative | 4022096 - 4022686 | 22154.3 |
| duf2857 domain-containing protein | CE139_RS18565 | Not Available | Positive | 4023283 - 4023777 | 17433.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





