Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enterochelin esterase | CE139_RS18430 | Not Available | Negative | 3992774 - 3994024 | 46273.8 |
| tonb-dependent siderophore receptor | CE139_RS18435 | Not Available | Negative | 3994108 - 3996327 | 80783.2 |
| hypothetical protein | CE139_RS18440 | Not Available | Negative | 3996616 - 3996879 | 9122.22 |
| hypothetical protein | CE139_RS18445 | Not Available | Negative | 3997193 - 3997474 | 9893.36 |
| duf2857 domain-containing protein | CE139_RS25835 | Not Available | Positive | 3998587 - 3998982 | 14257.1 |
| methyl-accepting chemotaxis protein | CE139_RS25840 | Not Available | Positive | 3999085 - 3999840 | 26838.3 |
| substrate-binding domain-containing protein | CE139_RS18455 | Not Available | Positive | 3999855 - 4000775 | 33060.0 |
| autotransporter domain-containing protein | CE139_RS18460 | Not Available | Negative | 4000863 - 4003937 | 106823.0 |
| gnat family n-acetyltransferase | CE139_RS18465 | Not Available | Negative | 4004124 - 4004648 | 19554.6 |
| duf1654 domain-containing protein | CE139_RS18470 | Not Available | Negative | 4004707 - 4004949 | 9179.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





