Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CE139_RS18280 | Not Available | Negative | 3958543 - 3959079 | 20026.9 |
| abc transporter atp-binding protein | CE139_RS18285 | Not Available | Negative | 3959076 - 3960728 | 60046.0 |
| abc transporter permease | CE139_RS18290 | Not Available | Negative | 3960725 - 3962182 | 52816.2 |
| abc transporter permease | CE139_RS18295 | Not Available | Negative | 3962188 - 3963165 | 35891.5 |
| abc transporter substrate-binding protein | CE139_RS18300 | Not Available | Negative | 3963162 - 3965384 | 83666.9 |
| cupin domain-containing protein | CE139_RS18305 | Not Available | Positive | 3965473 - 3965994 | 19268.2 |
| gnat family n-acetyltransferase | CE139_RS18310 | Not Available | Positive | 3965985 - 3966815 | 31120.0 |
| type ii 3-dehydroquinate dehydratase | CE139_RS18315 | Not Available | Negative | 3967142 - 3967588 | 16193.5 |
| duf2857 domain-containing protein | CE139_RS18320 | Not Available | Negative | 3967597 - 3968415 | 28806.6 |
| caib/baif coa transferase family protein | CE139_RS18325 | Not Available | Negative | 3968412 - 3969644 | 44340.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





